mmsegmentation/mmseg/models/segmentors/encoder_decoder.py

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# Copyright (c) OpenMMLab. All rights reserved.
[Enhancement] Remove batch inference assertion (#3210) Thanks for your contribution and we appreciate it a lot. The following instructions would make your pull request more healthy and more easily get feedback. If you do not understand some items, don't worry, just make the pull request and seek help from maintainers. ## Motivation https://github.com/open-mmlab/mmsegmentation/issues/3181 https://github.com/open-mmlab/mmsegmentation/issues/2965 https://github.com/open-mmlab/mmsegmentation/issues/2644 https://github.com/open-mmlab/mmsegmentation/issues/1645 https://github.com/open-mmlab/mmsegmentation/issues/1444 https://github.com/open-mmlab/mmsegmentation/issues/1370 https://github.com/open-mmlab/mmsegmentation/issues/125 ## Modification Remove the assertion at data_preprocessor ## BC-breaking (Optional) Does the modification introduce changes that break the backward-compatibility of the downstream repos? If so, please describe how it breaks the compatibility and how the downstream projects should modify their code to keep compatibility with this PR. ## Use cases (Optional) If this PR introduces a new feature, it is better to list some use cases here, and update the documentation. ## Checklist 1. Pre-commit or other linting tools are used to fix the potential lint issues. 2. The modification is covered by complete unit tests. If not, please add more unit test to ensure the correctness. 3. If the modification has potential influence on downstream projects, this PR should be tested with downstream projects, like MMDet or MMDet3D. 4. The documentation has been modified accordingly, like docstring or example tutorials.
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import logging
from typing import List, Optional
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import torch.nn as nn
import torch.nn.functional as F
[Enhancement] Remove batch inference assertion (#3210) Thanks for your contribution and we appreciate it a lot. The following instructions would make your pull request more healthy and more easily get feedback. If you do not understand some items, don't worry, just make the pull request and seek help from maintainers. ## Motivation https://github.com/open-mmlab/mmsegmentation/issues/3181 https://github.com/open-mmlab/mmsegmentation/issues/2965 https://github.com/open-mmlab/mmsegmentation/issues/2644 https://github.com/open-mmlab/mmsegmentation/issues/1645 https://github.com/open-mmlab/mmsegmentation/issues/1444 https://github.com/open-mmlab/mmsegmentation/issues/1370 https://github.com/open-mmlab/mmsegmentation/issues/125 ## Modification Remove the assertion at data_preprocessor ## BC-breaking (Optional) Does the modification introduce changes that break the backward-compatibility of the downstream repos? If so, please describe how it breaks the compatibility and how the downstream projects should modify their code to keep compatibility with this PR. ## Use cases (Optional) If this PR introduces a new feature, it is better to list some use cases here, and update the documentation. ## Checklist 1. Pre-commit or other linting tools are used to fix the potential lint issues. 2. The modification is covered by complete unit tests. If not, please add more unit test to ensure the correctness. 3. If the modification has potential influence on downstream projects, this PR should be tested with downstream projects, like MMDet or MMDet3D. 4. The documentation has been modified accordingly, like docstring or example tutorials.
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from mmengine.logging import print_log
from torch import Tensor
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from mmseg.registry import MODELS
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from mmseg.utils import (ConfigType, OptConfigType, OptMultiConfig,
OptSampleList, SampleList, add_prefix)
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from .base import BaseSegmentor
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@MODELS.register_module()
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class EncoderDecoder(BaseSegmentor):
"""Encoder Decoder segmentors.
EncoderDecoder typically consists of backbone, decode_head, auxiliary_head.
Note that auxiliary_head is only used for deep supervision during training,
which could be dumped during inference.
1. The ``loss`` method is used to calculate the loss of model,
which includes two steps: (1) Extracts features to obtain the feature maps
(2) Call the decode head loss function to forward decode head model and
calculate losses.
.. code:: text
loss(): extract_feat() -> _decode_head_forward_train() -> _auxiliary_head_forward_train (optional)
_decode_head_forward_train(): decode_head.loss()
_auxiliary_head_forward_train(): auxiliary_head.loss (optional)
2. The ``predict`` method is used to predict segmentation results,
which includes two steps: (1) Run inference function to obtain the list of
seg_logits (2) Call post-processing function to obtain list of
``SegDataSample`` including ``pred_sem_seg`` and ``seg_logits``.
.. code:: text
predict(): inference() -> postprocess_result()
infercen(): whole_inference()/slide_inference()
whole_inference()/slide_inference(): encoder_decoder()
encoder_decoder(): extract_feat() -> decode_head.predict()
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3. The ``_forward`` method is used to output the tensor by running the model,
which includes two steps: (1) Extracts features to obtain the feature maps
(2)Call the decode head forward function to forward decode head model.
.. code:: text
_forward(): extract_feat() -> _decode_head.forward()
Args:
backbone (ConfigType): The config for the backnone of segmentor.
decode_head (ConfigType): The config for the decode head of segmentor.
neck (OptConfigType): The config for the neck of segmentor.
Defaults to None.
auxiliary_head (OptConfigType): The config for the auxiliary head of
segmentor. Defaults to None.
train_cfg (OptConfigType): The config for training. Defaults to None.
test_cfg (OptConfigType): The config for testing. Defaults to None.
data_preprocessor (dict, optional): The pre-process config of
:class:`BaseDataPreprocessor`.
pretrained (str, optional): The path for pretrained model.
Defaults to None.
init_cfg (dict, optional): The weight initialized config for
:class:`BaseModule`.
""" # noqa: E501
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def __init__(self,
backbone: ConfigType,
decode_head: ConfigType,
neck: OptConfigType = None,
auxiliary_head: OptConfigType = None,
train_cfg: OptConfigType = None,
test_cfg: OptConfigType = None,
data_preprocessor: OptConfigType = None,
pretrained: Optional[str] = None,
init_cfg: OptMultiConfig = None):
super().__init__(
data_preprocessor=data_preprocessor, init_cfg=init_cfg)
if pretrained is not None:
assert backbone.get('pretrained') is None, \
'both backbone and segmentor set pretrained weight'
backbone.pretrained = pretrained
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self.backbone = MODELS.build(backbone)
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if neck is not None:
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self.neck = MODELS.build(neck)
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self._init_decode_head(decode_head)
self._init_auxiliary_head(auxiliary_head)
self.train_cfg = train_cfg
self.test_cfg = test_cfg
assert self.with_decode_head
def _init_decode_head(self, decode_head: ConfigType) -> None:
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"""Initialize ``decode_head``"""
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self.decode_head = MODELS.build(decode_head)
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self.align_corners = self.decode_head.align_corners
self.num_classes = self.decode_head.num_classes
self.out_channels = self.decode_head.out_channels
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def _init_auxiliary_head(self, auxiliary_head: ConfigType) -> None:
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"""Initialize ``auxiliary_head``"""
if auxiliary_head is not None:
if isinstance(auxiliary_head, list):
self.auxiliary_head = nn.ModuleList()
for head_cfg in auxiliary_head:
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self.auxiliary_head.append(MODELS.build(head_cfg))
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else:
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self.auxiliary_head = MODELS.build(auxiliary_head)
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def extract_feat(self, inputs: Tensor) -> List[Tensor]:
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"""Extract features from images."""
x = self.backbone(inputs)
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if self.with_neck:
x = self.neck(x)
return x
def encode_decode(self, inputs: Tensor,
batch_img_metas: List[dict]) -> Tensor:
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"""Encode images with backbone and decode into a semantic segmentation
map of the same size as input."""
x = self.extract_feat(inputs)
seg_logits = self.decode_head.predict(x, batch_img_metas,
self.test_cfg)
return seg_logits
def _decode_head_forward_train(self, inputs: List[Tensor],
data_samples: SampleList) -> dict:
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"""Run forward function and calculate loss for decode head in
training."""
losses = dict()
loss_decode = self.decode_head.loss(inputs, data_samples,
self.train_cfg)
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losses.update(add_prefix(loss_decode, 'decode'))
return losses
def _auxiliary_head_forward_train(self, inputs: List[Tensor],
data_samples: SampleList) -> dict:
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"""Run forward function and calculate loss for auxiliary head in
training."""
losses = dict()
if isinstance(self.auxiliary_head, nn.ModuleList):
for idx, aux_head in enumerate(self.auxiliary_head):
loss_aux = aux_head.loss(inputs, data_samples, self.train_cfg)
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losses.update(add_prefix(loss_aux, f'aux_{idx}'))
else:
loss_aux = self.auxiliary_head.loss(inputs, data_samples,
self.train_cfg)
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losses.update(add_prefix(loss_aux, 'aux'))
return losses
def loss(self, inputs: Tensor, data_samples: SampleList) -> dict:
"""Calculate losses from a batch of inputs and data samples.
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Args:
inputs (Tensor): Input images.
data_samples (list[:obj:`SegDataSample`]): The seg data samples.
It usually includes information such as `metainfo` and
`gt_sem_seg`.
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Returns:
dict[str, Tensor]: a dictionary of loss components
"""
x = self.extract_feat(inputs)
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losses = dict()
loss_decode = self._decode_head_forward_train(x, data_samples)
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losses.update(loss_decode)
if self.with_auxiliary_head:
loss_aux = self._auxiliary_head_forward_train(x, data_samples)
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losses.update(loss_aux)
return losses
def predict(self,
inputs: Tensor,
data_samples: OptSampleList = None) -> SampleList:
"""Predict results from a batch of inputs and data samples with post-
processing.
Args:
inputs (Tensor): Inputs with shape (N, C, H, W).
data_samples (List[:obj:`SegDataSample`], optional): The seg data
samples. It usually includes information such as `metainfo`
and `gt_sem_seg`.
Returns:
list[:obj:`SegDataSample`]: Segmentation results of the
input images. Each SegDataSample usually contain:
- ``pred_sem_seg``(PixelData): Prediction of semantic segmentation.
- ``seg_logits``(PixelData): Predicted logits of semantic
segmentation before normalization.
"""
if data_samples is not None:
batch_img_metas = [
data_sample.metainfo for data_sample in data_samples
]
else:
batch_img_metas = [
dict(
ori_shape=inputs.shape[2:],
img_shape=inputs.shape[2:],
pad_shape=inputs.shape[2:],
padding_size=[0, 0, 0, 0])
] * inputs.shape[0]
seg_logits = self.inference(inputs, batch_img_metas)
return self.postprocess_result(seg_logits, data_samples)
def _forward(self,
inputs: Tensor,
data_samples: OptSampleList = None) -> Tensor:
"""Network forward process.
Args:
inputs (Tensor): Inputs with shape (N, C, H, W).
data_samples (List[:obj:`SegDataSample`]): The seg
data samples. It usually includes information such
as `metainfo` and `gt_sem_seg`.
Returns:
Tensor: Forward output of model without any post-processes.
"""
x = self.extract_feat(inputs)
return self.decode_head.forward(x)
def slide_inference(self, inputs: Tensor,
batch_img_metas: List[dict]) -> Tensor:
"""Inference by sliding-window with overlap.
If h_crop > h_img or w_crop > w_img, the small patch will be used to
decode without padding.
Args:
inputs (tensor): the tensor should have a shape NxCxHxW,
which contains all images in the batch.
batch_img_metas (List[dict]): List of image metainfo where each may
also contain: 'img_shape', 'scale_factor', 'flip', 'img_path',
'ori_shape', and 'pad_shape'.
For details on the values of these keys see
`mmseg/datasets/pipelines/formatting.py:PackSegInputs`.
Returns:
Tensor: The segmentation results, seg_logits from model of each
input image.
"""
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h_stride, w_stride = self.test_cfg.stride
h_crop, w_crop = self.test_cfg.crop_size
batch_size, _, h_img, w_img = inputs.size()
out_channels = self.out_channels
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h_grids = max(h_img - h_crop + h_stride - 1, 0) // h_stride + 1
w_grids = max(w_img - w_crop + w_stride - 1, 0) // w_stride + 1
preds = inputs.new_zeros((batch_size, out_channels, h_img, w_img))
count_mat = inputs.new_zeros((batch_size, 1, h_img, w_img))
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for h_idx in range(h_grids):
for w_idx in range(w_grids):
y1 = h_idx * h_stride
x1 = w_idx * w_stride
y2 = min(y1 + h_crop, h_img)
x2 = min(x1 + w_crop, w_img)
y1 = max(y2 - h_crop, 0)
x1 = max(x2 - w_crop, 0)
crop_img = inputs[:, :, y1:y2, x1:x2]
# change the image shape to patch shape
batch_img_metas[0]['img_shape'] = crop_img.shape[2:]
# the output of encode_decode is seg logits tensor map
# with shape [N, C, H, W]
crop_seg_logit = self.encode_decode(crop_img, batch_img_metas)
preds += F.pad(crop_seg_logit,
(int(x1), int(preds.shape[3] - x2), int(y1),
int(preds.shape[2] - y2)))
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count_mat[:, :, y1:y2, x1:x2] += 1
assert (count_mat == 0).sum() == 0
seg_logits = preds / count_mat
return seg_logits
def whole_inference(self, inputs: Tensor,
batch_img_metas: List[dict]) -> Tensor:
"""Inference with full image.
Args:
inputs (Tensor): The tensor should have a shape NxCxHxW, which
contains all images in the batch.
batch_img_metas (List[dict]): List of image metainfo where each may
also contain: 'img_shape', 'scale_factor', 'flip', 'img_path',
'ori_shape', and 'pad_shape'.
For details on the values of these keys see
`mmseg/datasets/pipelines/formatting.py:PackSegInputs`.
Returns:
Tensor: The segmentation results, seg_logits from model of each
input image.
"""
seg_logits = self.encode_decode(inputs, batch_img_metas)
return seg_logits
def inference(self, inputs: Tensor, batch_img_metas: List[dict]) -> Tensor:
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"""Inference with slide/whole style.
Args:
inputs (Tensor): The input image of shape (N, 3, H, W).
batch_img_metas (List[dict]): List of image metainfo where each may
also contain: 'img_shape', 'scale_factor', 'flip', 'img_path',
'ori_shape', 'pad_shape', and 'padding_size'.
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For details on the values of these keys see
`mmseg/datasets/pipelines/formatting.py:PackSegInputs`.
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Returns:
Tensor: The segmentation results, seg_logits from model of each
input image.
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"""
assert self.test_cfg.get('mode', 'whole') in ['slide', 'whole'], \
f'Only "slide" or "whole" test mode are supported, but got ' \
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f'{self.test_cfg["mode"]}.'
ori_shape = batch_img_metas[0]['ori_shape']
[Enhancement] Remove batch inference assertion (#3210) Thanks for your contribution and we appreciate it a lot. The following instructions would make your pull request more healthy and more easily get feedback. If you do not understand some items, don't worry, just make the pull request and seek help from maintainers. ## Motivation https://github.com/open-mmlab/mmsegmentation/issues/3181 https://github.com/open-mmlab/mmsegmentation/issues/2965 https://github.com/open-mmlab/mmsegmentation/issues/2644 https://github.com/open-mmlab/mmsegmentation/issues/1645 https://github.com/open-mmlab/mmsegmentation/issues/1444 https://github.com/open-mmlab/mmsegmentation/issues/1370 https://github.com/open-mmlab/mmsegmentation/issues/125 ## Modification Remove the assertion at data_preprocessor ## BC-breaking (Optional) Does the modification introduce changes that break the backward-compatibility of the downstream repos? If so, please describe how it breaks the compatibility and how the downstream projects should modify their code to keep compatibility with this PR. ## Use cases (Optional) If this PR introduces a new feature, it is better to list some use cases here, and update the documentation. ## Checklist 1. Pre-commit or other linting tools are used to fix the potential lint issues. 2. The modification is covered by complete unit tests. If not, please add more unit test to ensure the correctness. 3. If the modification has potential influence on downstream projects, this PR should be tested with downstream projects, like MMDet or MMDet3D. 4. The documentation has been modified accordingly, like docstring or example tutorials.
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if not all(_['ori_shape'] == ori_shape for _ in batch_img_metas):
print_log(
'Image shapes are different in the batch.',
logger='current',
level=logging.WARN)
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if self.test_cfg.mode == 'slide':
seg_logit = self.slide_inference(inputs, batch_img_metas)
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else:
seg_logit = self.whole_inference(inputs, batch_img_metas)
return seg_logit
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def aug_test(self, inputs, batch_img_metas, rescale=True):
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"""Test with augmentations.
Only rescale=True is supported.
"""
# aug_test rescale all imgs back to ori_shape for now
assert rescale
# to save memory, we get augmented seg logit inplace
seg_logit = self.inference(inputs[0], batch_img_metas[0], rescale)
for i in range(1, len(inputs)):
cur_seg_logit = self.inference(inputs[i], batch_img_metas[i],
rescale)
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seg_logit += cur_seg_logit
seg_logit /= len(inputs)
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seg_pred = seg_logit.argmax(dim=1)
# unravel batch dim
seg_pred = list(seg_pred)
return seg_pred