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34 Commits (9801c62fd79b1e337029360ff1955f62fe0f3e29)

Author SHA1 Message Date
谢昕辰 c448646a92
[Doc] Refine doc and fix links (#2821) 
## Motivation

- Create the `main` branch

## Modification

Modify links from `dev-1.x` to `main`
 2023-03-31 16:26:30 +08:00
谢昕辰 f6de1aad81
[Dev] update update-model-index pre-commit hook (#2667) 2023-03-17 19:12:58 +08:00
谢昕辰 a3a144a361
[Refactor] Update config names (#1964) 
* rename ann configs

* update ann yml

* update

* update

* update

* update

* update

* update ann readme

* update

* update deeplabv3

* update readme

* fix yml

* fix beit
 2022-08-26 18:48:56 +08:00
xiexinch 28a3d89b7a Update pre-commit yaml and md2yml.py 2022-07-05 15:58:48 +08:00
zhengmiao b23982d1b3 [Refactory] Refactory BaseSegmentor based BaseModel 2022-06-19 06:32:09 +00:00
limengzhang.vendor 34711422ac [Fix] Fix batch size of val_dataloader to 1. 2022-06-12 09:10:26 +00:00
linfangjian.vendor dd9c411335 [Refactor] Refactor decode_head and segmentors and add preprocess_cfg 2022-06-10 14:02:40 +00:00
limengzhang.vendor fcb9cb4571 [Refactor] Refactor lr_config 2022-06-08 09:25:00 +00:00
limengzhang.vendor 5b9c29f992 [Refactor] Refactor Dataset and its Transform Config files 2022-05-31 14:28:42 +00:00
MengzhangLI ea8556694b [Fix] Fix some wrong urls of models or log in ./configs (#1433) 2022-03-30 21:06:14 +08:00
MengzhangLI 59fa6f648c [Fix] Update correct `In Collection` in metafile of each configs. (#1239) 
* change md2yml file

* update metafile

* update twins In Collection automatically

* fix twins metafile

* fix twins metafile

* all metafile use value of Method

* update collect name

* update collect name

* fix some typo

* fix FCN D6

* change JPU to FastFCN

* fix some typos in DNLNet, NonLocalNet, SETR, Segmenter, STDC, FastSCNN

* fix typo in stdc

* fix typo in DNLNet and UNet

* fix NonLocalNet typo
 2022-02-23 18:00:28 +08:00
MengzhangLI 80e8504956 [Doc] Update `README.md` in configs according to latest standard. (#1233) 
* fix README.md in configs

* fix README.md in configs

* modify [ALGORITHM] to [BACKBONE] in backbone config README.md
 2022-01-25 20:45:39 +08:00
MengzhangLI 2b4076add8 [Fix] Add note in UNet readme.md #1163 2021-12-24 23:29:59 +08:00
MengzhangLI f3cd764f55 [Feature] Add UNet benchmark with multiple losses supervision (#1143) 
* upload models and new configs

* fix hrf readme error

* fix hrf readme error

* add mDice of old models

* refactor configs
 2021-12-23 21:38:51 +08:00
MengzhangLI e2ff55d28a [Fix] Add <!-- [ABSTRACT] --> in metafile #1127 2021-12-14 19:12:56 +08:00
MengzhangLI 1cf6049758 change (#1083) 2021-11-30 20:54:25 +08:00
MengzhangLI c4a52a523c [Docs] Add abstract and image for every paper (#1060) 
* add abstract and main figure

* add abstract and main figure
 2021-11-30 20:34:45 +08:00
MengzhangLI 6d88b07084 fixing dice metric in unet (#1041) 2021-11-16 20:14:17 +08:00
sennnnn 2800d43507 [Enhancement] Change readme style and Update metafiles. (#895) 
* [Enhancement] Change readme style and prepare for metafiles update.

* Update apcnet github repo url.

* add code snippet.

* split code snippet & official repo.

* update md2yml hook.

* Update metafiles.

* Add converted from attribute.

* process conflict.

* Put defualt variable value.

* update bisenet v2 metafile.

* checkout to ubuntu environment.

* pop empty attribute & make task attribute list.

* update readme style

* update readme style

* update metafiles

Co-authored-by: Junjun2016 <hejunjun@sjtu.edu.cn>
 2021-09-28 16:25:37 +08:00
sennnnn d3dc4f9583 [Enhancement] Add Dev tools to boost develop (#798) 
* Modify default work dir when training.

* Refactor gather_models.py.

* Add train and test matching list.

* Regression benchmark list.

* lower readme name to upper readme name.

* Add url check tool and model inference test tool.

* Modify tool name.

* Support duplicate mode of log json url check.

* Add regression benchmark evaluation automatic tool.

* Add train script generator.

* Only Support script running.

* Add evaluation results gather.

* Add exec Authority.

* Automatically make checkpoint root folder.

* Modify gather results save path.

* Coarse-grained train results gather tool.

* Complete benchmark train script.

* Make some little modifications.

* Fix checkpoint urls.

* Fix unet checkpoint urls.

* Fix fast scnn & fcn checkpoint url.

* Fix fast scnn checkpoint urls.

* Fix fast scnn url.

* Add differential results calculation.

* Add differential results of regression benchmark train results.

* Add an extra argument to select model.

* Update nonlocal_net & hrnet checkpoint url.

* Fix checkpoint url of hrnet and Fix some tta evaluation results and modify gather models tool.

* Modify fast scnn checkpoint url.

* Resolve new comments.

* Fix url check status code bug.

* Resolve some comments.

* Modify train scripts generator.

* Modify work_dir of regression benchmark results.

* model gather tool modification.
 2021-09-02 09:44:51 -07:00
Junjun2016 18bbad97f8 Fix random behavior of update_model_index in pre-commit hook (#784) 2021-08-15 23:33:08 +08:00
谢昕辰 2f3f027c3d [Enhancement] md2yml pre-commit hook (#732) 
* init script

* update scripts and generate new yml

* fix lint: deeplabv3plus.yml

* modify resolution representation

* remove  field

* format crop_size
 2021-07-31 09:31:58 -07:00
MengzhangLI 425e574b26 [Fix] Fix wrong links of .pth and .json file in DMNet and UNet(FCN) README.md (#660) 
* readme_link_fix

* readme_link_fix

* readme_link_fix

* Fix UNet FCN Download link [#415]

* Fix UNet FCN Download link [#415]

* Fix DMNet Download link [#548]

* Fix DMNet Download link [#548]
 2021-07-02 21:12:22 +08:00
Junjun2016 372646caf5 update metafiles (#661) 
* update metafiles

* update metafiles
 2021-07-01 22:31:00 +08:00
Junjun2016 34f4089683 change inference time from fps to ms/im 2021-06-21 22:08:03 +08:00
谢昕辰 725d5aa002 [Feature] support mim (#549) 
* dice loss

* format code, add docstring and calculate denominator without valid_mask

* minor change

* restore

* add metafile

* add manifest.in and add config at setup.py

* add requirements

* modify manifest

* modify manifest

* Update MANIFEST.in

* add metafile

* add metadata

* fix typo

* Update metafile.yml

* Update metafile.yml

* minor change

* Update metafile.yml

* add subfix

* fix mmshow

* add more  metafile

* add config to model_zoo

* fix bug

* Update mminstall.txt

* [fix] Add models

* [Fix] Add collections

* [fix] Modify collection name

* [Fix] Set datasets to unet metafile

* [Fix] Modify collection names

* complement inference time
 2021-05-31 15:07:24 -07:00
Jerry Jiarui XU 995bcb39cd comment tag (#505) 2021-04-24 09:58:59 -07:00
sennnnn 38f188d025 Add some publish information of implemented models (#508) 
* Add some publish information

* Fix some readme omission.
 2021-04-24 09:58:15 -07:00
Jerry Jiarui XU 2cb5e25183 Fix sem_fpn and unet README.md (#492) 2021-04-18 02:56:53 -07:00
Jerry Jiarui XU d003f661cc [Improvement] Add cfg link in modelzoo (#468) 2021-04-09 14:36:03 -07:00
Jerry Jiarui XU 4423d32702 [Improvement] Move train_cfg/test_cfg inside model (#341) 
* [Improvement] Move train_cfg/test_cfg inside model

* fixed config dict

* fixed config dict
 2021-01-19 17:06:23 -08:00
Junjun2016 d56f6823a2 Add more UNet-based medical segmentation benchmark (#324) 
* Add UNet as backbone and FCN PSPNet DeepLabV3 as decode_head benchmark on 4 retinal vessel segmentation datasets

* adjust README of UNet
 2021-01-11 00:07:59 -08:00
Jerry Jiarui XU ce232deb09 [Improvement] Add tags for each README.md (#340) 2021-01-10 21:35:09 -08:00
Junjun2016 2e479d346b Add 4 retinal vessel segmentation benchmark (#315) 
* add 4 retinal vessel segmentation configs of UNet

* fix flip augmentation

* add unet benchmark on 4 medical datasets

* fix hrf bug
 2020-12-23 23:58:09 -08:00