This is an almost exact duplicate of #2500 (that was made to the
`master` branch) now applied to the `1.x` branch.
---
## Motivation
I want to fix a bug through this PR. The bug occurs when two options --
`reduce_zero_label=True`, and custom classes are used.
`reduce_zero_label` remaps the GT seg labels by remapping the zero-class
to 255 which is ignored. Conceptually, this should occur *before* the
`label_map` is applied, which maps *already reduced labels*. However,
currently, the `label_map` is applied before the zero label is reduced.
## Modification
The modification is simple:
- I've just interchanged the order of the two operations by moving a few
lines from bottom to top.
- I've added a test that passes when the fix is introduced, and fails on
the original `master` branch.
## BC-breaking (Optional)
I do not anticipate this change braking any backward-compatibility.
## Checklist
- [x] Pre-commit or other linting tools are used to fix the potential
lint issues.
- _I've fixed all linting/pre-commit errors._
- [x] The modification is covered by complete unit tests. If not, please
add more unit test to ensure the correctness.
- _I've added a unit test._
- [x] If the modification has potential influence on downstream
projects, this PR should be tested with downstream projects, like MMDet
or MMDet3D.
- _I don't think this change affects MMDet or MMDet3D._
- [x] The documentation has been modified accordingly, like docstring or
example tutorials.
- _This change fixes an existing bug and doesn't require modifying any
documentation/docstring._
## Motivation
Support for biomedical 3d images augmentation.
## Modification
Add BioMedical3DRandomFlip in mmseg/datasets/transforms/transforms.py.
Co-authored-by: MeowZheng <meowzheng@outlook.com>
## Motivation
The motivation of this PR is to add `gt_edge_map` field to support
boundary loss.
## Modification
- GenerateEdge
Modify `gt_edge` field to `gt_edge_map`.
- PackSegInputs
Add `gt_edge_map` to data_sample.
- stack_batch
Pad `gt_edge_map` to max_shape.
## BC-breaking (Optional)
No
## Use cases (Optional)
Reference `GenerateEdge`.
* tta init
* use mmcv transform
* test city
* add multiscale
* fix merge
* add softmax to post process
* add ut
* add tta pipeline to other datasets
* remove softmax
* add encoder_decoder_tta ut
* add encoder_decoder_tta ut
* rename
* rename file
* rename config
* rm aug_test
* move flip to post process
* fix channel
* [Feature]Add Decathlon dataset
* fix test data
* add file
* remove order
* revise default value for prefix
* modify example
* revise based on comments
* add comments for ut
* [WIP] Refactor data flow
* model return
* [WIP] Refactor data flow
* support data_samples is optional
* fix benchmark
* fix base
* minors
* rebase
* fix api
* ut
* fix api inference
* comments
* docstring
* docstring
* docstring
* fix bug of slide inference
* add assert c > 1
* [Feature] Add SegVisualizer
* change name to visualizer_example
* fix inference api
* fix video demo and refine inference api
* fix
* mmseg compose
* set default device to cuda:0
* fix import
* update dir
* rm engine/visualizer ut
* refine inference api and docs
* rename
Co-authored-by: MengzhangLI <mcmong@pku.edu.cn>
Siddharth Ancha
Leeinsn
Wencheng Wu
谢昕辰
王永韬
legendchilli
Fivethousand
Haoyu Wang
Jin Ye
MengzhangLI
Miao Zheng
zhengmiao